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Commit fbf93c5f authored by Andrea Censi's avatar Andrea Censi
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......@@ -19,9 +19,39 @@ struct sm1_params {
extern int distance_counter;
extern void sm_options(struct sm_params*p, struct option*ops);
const char *sm1_banner =
"There are TWO ways to define the input to this program.\n"
" \n"
"Say that in file A there are the scans \n"
" \n"
" A1 A2 A3 A4 ... \n"
" \n"
"and in file B there are the scans \n"
" \n"
" B1 B2 B3 B4 ... \n"
" \n"
"With this command line: \n"
" \n"
" sm1 --file1 A --file2 B \n"
" \n"
"the matchings will be: \n"
" \n"
" (A1, B1), (A2, B2), etc.\n"
" \n"
"While with this command line:\n"
" \n"
" sm1 --file1 A --file2 A\n"
" \n"
"the matchings will be \n"
" \n"
" (A1, A2), (A3, A4), (A5, A6), ... \n"
" \n";
int main(int argc, const char*argv[]) {
sm_set_program_name(argv[0]);
options_banner(sm1_banner);
struct sm_params params;
struct sm_result result;
......
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