diff --git a/doxygen_template.conf b/doxygen_template.conf
index 347af2ef86bf4786d49b13d48c12146b0d001b01..ba510ce08e1b9d384c42521222a0224b97699521 100755
--- a/doxygen_template.conf
+++ b/doxygen_template.conf
@@ -83,7 +83,7 @@ WARN_LOGFILE           =
 # configuration options related to the input files
 #---------------------------------------------------------------------------
 INPUT                  = ../src \
-                         ../doc/main.dox
+                         ../ReadMe.md
 INPUT_ENCODING         = UTF-8
 FILE_PATTERNS          = *.c \
                          *.h \
diff --git a/new_project.sh b/new_project.sh
index 4390c97921e043ebeae4cb38d33f011529f09a4f..edda33170cc876400bc18bd9836a33df57afe144 100755
--- a/new_project.sh
+++ b/new_project.sh
@@ -246,7 +246,5 @@ rm driver_src_template.cpp
 rm driver_header_template.h
 rm driver_example_src_template.cpp
 rm Findlib_template.cmake
-rm main_template.dox
-rm tmp.dox
 rm template.tar.gz
 rm new_project.sh